7tz1_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A MYCOBACTERIOPHAGE CLUSTER A2 IMMUNITY REPRESSOR:DNA COMPLEX (Immunity repressor)
reference	Terwilliger et al. 'Nat 13 4105 2022
source	Mycobacterium phage TipsytheTRex
experiment	X-ray (resolution=2.79, R-factor=0.203)
structural superfamily	Sigma3 and sigma4 domains of RNA polymerase sigma factors;
redundant complexes	7r6r_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7tz1_A interface=30,31,32,33,35,36,61,64,65,67,70,94, sripltlseiedlrrkgfnqteiaelygvTRQAvSWhkktyggrlttrqivqqnwpwdtrKphDKsKafQrlrdhgeymrvgsfrtmsedkkkRllswwkmlrdndlvlefdpsiepyegmagggfryvprdisdddllirvnehtqltaegellwswpddieells
interface signature	TRQASWKDKKQR

Estimated binding specificities ?

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# IC=15.694 IC/col=1.046 n_of_columns=15

specificity:

A |   3   6   7   2   0  96   1  69   0   0   0  61   0   0   0
C |   7  80   3   3   0   0  92  13   0  96  96   9  96  96   0
G |  80   3  21   3  96   0   3  11  96   0   0   3   0   0  96
T |   6   7  65  88   0   0   0   3   0   0   0  23   0   0   0

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updated Sat Sep 14 04:46:48 2024