7ve5_AB : 3D-footprint complex

structure name	C-TERMINAL DOMAIN OF VRAR
reference	Kumar et al. 'Protein 31 e4286 2022
source	Staphylococcus aureus
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	7ve5_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ve5_A interface=35,38,39,42, elyemlteremeillliakgysnqeiasashitiKtvKThvSnilsklevqdrtqaviyafqhnli > 7ve5_B interface=33,35,36,38,39,40,42, elyemlteremeillliakgysnqeiasashiTiKTvKTHvSnilsklevqdrtqaviyafqhnli
interface signature	KKTS/TKTKTHS

Estimated binding specificities ?

readout + contact

# IC=7.841 IC/col=0.653 n_of_columns=12

specificity:

A |  78   0   2  24  24  54   0  14  24   0   0  96
C |   6  96  24  24  24  14   0  12  24  14   2   0
G |   6   0   6  24  24  22  96  10  24   0  92   0
T |   6   0  64  24  24   6   0  60  24  82   2   0

scan!

home
updated Sun Dec 15 16:10:01 2024