7vjm_AB : 3D-footprint complex

structure name	ACA1 IN COMPLEX WITH 19BP PALINDROMIC DNA SUBSTRATE
reference	Zhang et al. J.Biol.Chem. 297 101357 2021
source	Pseudomonas phage JBD30
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	7c0g_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vjm_A interface=28,37,39,40,42,43,54, vktpdasnhdpdprylrgllkkagisqRraaellglSdRVmRYylsedikegyRpapytvqfaleclandpps > 7vjm_B interface=36,38,39,41,42,53, ktpdasnhdpdprylrgllkkagisqrraaellglSdRVmRYylsedikegyRpapytvqfaleclandpps
interface signature	RSRVRYR/SRVRYR

Estimated binding specificities ?

readout + contact

# IC=14.245 IC/col=0.890 n_of_columns=16

specificity:

A |  73   0   0   0  96   0  24  24  24   0   0   8   0   7   7  73
C |   7   0   0  89   0  96  24  24  24   0   0   0  96  89   7   7
G |   9  96  96   0   0   0  24  24  24  96   0  88   0   0   9   7
T |   7   0   0   7   0   0  24  24  24   0  96   0   0   0  73   9

scan!

home
updated Fri Jun 26 22:02:10 2026