7vo0_GHKLMN : 3D-footprint complex

structure name	STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (TRIMER OF DIMERS)
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7vo0_N
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vo0_G interface=6,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_H interface=28,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_K interface=6,44,45,47, ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_L interface=28,43,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_M interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_N interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga
interface signature	RTTYR/QTTYR/RTTY/QLTTYR/RQLTTYR/RQLTTYR

Estimated binding specificities ?

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# IC=22.398 IC/col=1.067 n_of_columns=21

specificity:

A |  90   3  94   3   0  24   0  92  96   0   0   5   1   1   0   1   0  80   3   1   1
C |   1  88   0   3   0  24  96   3   0  96   0  19   4   4   0   1  96   7   3   1   1
G |   4   4   0   5  96  24   0   1   0   0  96  69   1  90   2   1   0   6  87   4  93
T |   1   1   2  85   0  24   0   0   0   0   0   3  90   1  94  93   0   3   3  90   1

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updated Wed Sep 11 15:21:52 2024