7vo0_GHKLMN : 3D-footprint complex

structure name	STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (TRIMER OF DIMERS)
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7vo0_N
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vo0_G interface=6,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_H interface=28,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_K interface=6,44,45,47, ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_L interface=28,43,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_M interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo0_N interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga
interface signature	RTTYR/QTTYR/RTTY/QLTTYR/RQLTTYR/RQLTTYR

Estimated binding specificities ?

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# IC=22.353 IC/col=1.064 n_of_columns=21

specificity:

A |  92   6  94   9   0  24   0  92  96   0   0   9   0   1   0   1   0  76   7   1   1
C |   3  88   1   3   0  24  96   1   0  96   0   9   0   1   0   0  96   9   9   1   1
G |   1   1   1   7  96  24   0   3   0   0  96  75   0  90   0   1   0  10  75   1  90
T |   0   1   0  77   0  24   0   0   0   0   0   3  96   4  96  94   0   1   5  93   4

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updated Sun Dec 15 16:15:17 2024