7vo9_GHMN : 3D-footprint complex

structure name	STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (DIMER OF DIMERS)
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7vo0_N
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vo9_G interface=6,28,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_H interface=28,43,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_M interface=6,28,43,44,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTtvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_N interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga
interface signature	RQTTYR/QLTTYR/RQLTYR/RQLTTYR

Estimated binding specificities ?

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# IC=20.700 IC/col=0.900 n_of_columns=23

specificity:

A |   0  24  10  24  24   0  96   2  93  96   0   0   2   0  10   0   0   9  93   0   0  24   7
C |  96  24  68  24  24   2   0  88   1   0  96   0   2   0   6   0   3  68   0   0   0  24  73
G |   0  24  10  24  24  90   0   2   2   0   0  96  88   0  73   0   0   7   3  96   0  24  11
T |   0  24   8  24  24   4   0   4   0   0   0   0   4  96   7  96  93  12   0   0  96  24   5

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updated Wed Sep 11 15:22:43 2024