7vo9_GHMN : 3D-footprint complex

structure name	STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (DIMER OF DIMERS)
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7vo0_N
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vo9_G interface=6,28,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_H interface=28,43,44,45,47,48, ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_M interface=6,28,43,44,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTtvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga > 7vo9_N interface=6,28,43,44,45,47,48, ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga
interface signature	RQTTYR/QLTTYR/RQLTYR/RQLTTYR

Estimated binding specificities ?

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# IC=20.795 IC/col=0.904 n_of_columns=23

specificity:

A |   0  24  10  24  24   0  96   4  92  96   0   0   4   0   6   0   2  10  96   0   0  24  10
C |  96  24  65  24  24   2   0  88   2   0  96   0   2   0  10   0   0  69   0   0   0  24  73
G |   0  24   9  24  24  93   0   2   2   0   0  96  88   0  73   0   2  10   0  96   0  24   7
T |   0  24  12  24  24   1   0   2   0   0   0   0   2  96   7  96  92   7   0   0  96  24   6

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updated Sun Dec 15 16:16:22 2024