7vov_AB : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN IN COMPLEX WITH DNA 2
reference	Yoon et al. 'Nucleic 50 8929 2022
source	Homo sapiens
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7vou_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vov_A interface=48,51,52,55, qkppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkkgwqNsiRHnlSlnecfikvpregggerkgnywtldpacedmfekgnyrr > 7vov_B interface=45,49,52,53,56,73, aqkppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkKgwqNsiRHnlSlnecfikvpregggerKgnywtldpacedmfek
interface signature	NRHS/KNRHSK

Estimated binding specificities ?

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# IC=9.780 IC/col=0.815 n_of_columns=12

specificity:

A |  80  24  96  24   6   0  96   0   5  80   5   5
C |   5  24   0  24   5   0   0   0   5   5   6  80
G |   6  24   0  24   5   0   0   0   5   6   5   5
T |   5  24   0  24  80  96   0  96  81   5  80   6

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updated Wed Sep 11 15:23:17 2024