structure name | STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO 13-MER A/T-CENTRIC P- SELECTIN KB DNA FRAGMENT (Nuclear factor NF-kappa-B p52 subunit) |
reference | Meshcheryakov et al. 'To ? ? ? |
source | Homo sapiens |
experiment | X-ray (resolution=3.00, R-factor=?) |
structural superfamily | p53-like transcription factors;E set domains; |
sequence family | Rel homology domain RHD; IPT/TIG domain; |
multimeric complexes | 7w7l_AB |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RRYEHK |
Estimated binding specificities ?
readout + contact |
A | 41 0 0 0 0 70 C | 27 96 96 96 96 13 G | 15 0 0 0 0 0 T | 13 0 0 0 0 13scan! |
Dendrogram of similar interfaces ?
matrix formatRGRGYA--EC----HGKG------ L +7w7l_B +-1 RGRGYACCEC--SAHGKG------ L +-4 +7cli_B ! ! RGRGYTCCEC----HGKG------ L +---5 +1a3q_A ! ! RCRCYC--EC----HCKT----RG L +---6 +1svc_P ! ! RGRGYTCTEC------RT------ L +-----------7 +----1gji_A ! ! RGRGYTCCEC------KT------ L ! ! +2v2t_A ! +--------3 RGRG----EC------RGPTKT-- L --8 ! +2ram_A ! +-2 RGRGYTCTECRT----RT--KA-- L ! +2o61_A ! RGRG----EGRG------------ L +--------------------1bvo_A |
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updated Fri Dec 23 06:50:38 2022