7xv6_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN WITH C-TERMINAL EXTENSION (DBD-CTE) HOMODIMER BOUND TO DR1 RESPONSE ELEMENT
reference	Chen et al. 'Nucleic 51 1443 2023
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	7xv6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xv6_A interface=23,26,30,31,79, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqseRkpfdv > 7xv6_B interface=23,26,30,31, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs
interface signature	EKKRR/EKKR

Estimated binding specificities ?

readout + contact

# IC=11.613 IC/col=0.968 n_of_columns=12

specificity:

A |   9   0  96   0   0   7  24  14   0  88   0   0
C |   7   0   0  96  96  23  24   7   0   0  96  96
G |  14  96   0   0   0   7  24   7  96   7   0   0
T |  66   0   0   0   0  59  24  68   0   1   0   0

scan!

home
updated Fri Aug 1 01:00:24 2025