7xv6_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN WITH C-TERMINAL EXTENSION (DBD-CTE) HOMODIMER BOUND TO DR1 RESPONSE ELEMENT
reference	Chen et al. 'Nucleic 51 1443 2023
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	7xv6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xv6_A interface=23,26,30,31,79, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqseRkpfdv > 7xv6_B interface=23,26,30,31, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs
interface signature	EKKRR/EKKR

Estimated binding specificities ?

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# IC=11.633 IC/col=0.969 n_of_columns=12

specificity:

A |  17   0  96   0   0   0  24   8   0  87   0   0
C |   8   0   0  96  96  17  24  10   0   0  96  96
G |  10  96   0   0   0  10  24  17  96   9   0   0
T |  61   0   0   0   0  69  24  61   0   0   0   0

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updated Wed Sep 11 17:34:12 2024