7xv6_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN WITH C-TERMINAL EXTENSION (DBD-CTE) HOMODIMER BOUND TO DR1 RESPONSE ELEMENT
reference	Chen et al. 'Nucleic 51 1443 2023
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	7xv6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xv6_A interface=23,26,30,31,79, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqseRkpfdv > 7xv6_B interface=23,26,30,31, vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs
interface signature	EKKRR/EKKR

Estimated binding specificities ?

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# IC=10.539 IC/col=0.878 n_of_columns=12

specificity:

A |   0   0   0   0  67  24  24   0   0   9   0  67
C |   0   0  10  96  11  24  24   0   0   9  96   9
G |  96  96   0   0   9  24  24  96  96   2   0   9
T |   0   0  86   0   9  24  24   0   0  76   0  11

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updated Sun Dec 15 18:36:10 2024