7y7i_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CHICKEN KNL2 IN COMPLEX WITH THE CENP-A NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7bxt_ABCDEFGHMN 7by0_ABCDEFGH 7y7i_ABCDEFGH
redundant complexes	7bxt 7by0
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7y7i_E interface=2,3,4,28,48, pHRYrpgtvalreirryqkstellirrQpfarvvreicllftrgvdyRwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrg

  
  RG--RT----         +-----------------------------8grq_A    
                     ! 
  RG--------         !                             +8jh2_e    
                     !          +------------------2 
  RGLCRT----         !       +--4                  +8hr1_E    
                     !       !  ! 
  ------RA--       +-9     +-5  +-------------------6g0l_D    
                   ! !     ! ! 
  ----RG----       ! !   +-6 +----------------------5x0y_G    
                   ! !   ! ! 
  ----RG----       ! ! +-7 +------------------------8jla_C    
                   ! ! ! ! 
  ----RA--RA       ! ! ! +-------------------------6a5l_g    
                 -10 +-8 
  ----RT----       !   !                           +8u14_G    
                   !   !            +--------------1 
  ----RG----       !   +------------3              +8ox0_C    
                   !                ! 
  ----RA----       !                +--------------1zla_C    
                   !  
  ----RG----       +-----------------------------8txv_G

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updated Wed Dec 18 14:27:34 2024