3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

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updated Tue Jan 6 20:46:00 2026

structure name	THE CRYO-EM STRUCTURE OF CENP-A NUCLEOSOME IN COMPLEX WITH THE PHOSPHORYLATED CENP-C
source	GALLUS GALLUS / HOMO SAPIENS
experiment	NMR
structural superfamily	Histone-fold;PH domain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;
reference complex	5o9g_F 6a5l_g 6buz_H 6r8y_H 6see_H 6t7a_H 6upk_H 6x0n_f 6x59_H 6y5d_H 7e8d_H 7jzv_N 7k5x_H 7k60_H 7k63_H 7lyb_G 7nkx_f 7pet_H 7u0g_M 7vdt_B 7xzx_N 7y7i_E 8txv_G 8u14_G 8upf_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7by0_A interface=29,49, kphryrpgtvalreirryqkstellirrQpfarvvreicllftrgvdyRwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrglqgeg > 7by0_B interface= rdniqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdavTytehakrktvtamdvvyalkrqgrtlygf > 7by0_C interface=1,32, RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 7by0_D interface=3,9, rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa > 7by0_E interface= kpHryrpgTvalreirryqkstellirrqpfarvvreicllftrgvdyrwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrglqgeg > 7by0_F interface= rdNiqgitKpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf > 7by0_G interface=1,67, RakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 7by0_H interface= RsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa