interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: 450 PS SNAPSHOT. INCLUDES 450PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.15, R-factor=0.233)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRWRR

Estimated binding specificities ?

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# IC=2.970 IC/col=0.743 n_of_columns=4 specificity:   
A |   0   4   8  19
C |  96  88   8  45
G |   0   2  72  16
T |   0   2   8  16
scan!

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updated Fri Jan 9 19:46:18 2026