interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: 650 PS SNAPSHOT. INCLUDES 650PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.15, R-factor=0.217)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRWR

Estimated binding specificities ?

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# IC=2.810 IC/col=0.351 n_of_columns=8 specificity:   
A |  15  16  14  24   6  96  33  16
C |  15  52  14  24   6   0  21  14
G |  51  14  54  24  78   0  21  52
T |  15  14  14  24   6   0  21  14
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updated Fri Jan 9 19:47:29 2026