interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: DARK STATE AS COLLECTED IN SACLA
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.23, R-factor=0.165)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRWRR

Estimated binding specificities ?

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# IC=3.961 IC/col=0.792 n_of_columns=5 specificity:   
A |  14   8  74  96   0
C |  54   8   8   0   0
G |  14  70   7   0  96
T |  14  10   7   0   0
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updated Fri Jan 9 19:48:06 2026