interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: DARK STATE AS COLLECTED IN SACLA
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.23, R-factor=0.165)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRWRR

Estimated binding specificities ?

contactlogo
# IC=3.936 IC/col=0.787 n_of_columns=5 specificity:   
A |   0   0   7   8  14
C |  96  96   8  70  16
G |   0   0  74   8  52
T |   0   0   7  10  14
scan!

home
updated Sat Aug 2 22:11:14 2025