interface graph thumbnail
legend  pdf

structure nameDF-SFX MMCPDII-DNA COMPLEX: STEADY STATE OXIDIZED COMPLEX
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.75, R-factor=0.196)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRWRR

Estimated binding specificities ?

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# IC=3.925 IC/col=0.785 n_of_columns=5 specificity:   
A |  18   6  70  96   0
C |  42   6   8   0   0
G |  18  78   8   0  96
T |  18   6  10   0   0
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updated Fri Jan 9 19:48:14 2026