7yei_B : 3D-footprint complex

structure name	TR-SFX MMCPDII-DNA COMPLEX: 10 NS TIME-POINT COLLECTED IN SACLA. INCLUDES 10 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS (Deoxyribodipyrimidine photolyase)
reference	Ngura Putu et al. Science 382 eadd7795 2023
source	Methanosarcina mazei
experiment	X-ray (resolution=2.70, R-factor=0.242)
structural superfamily	Cryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence family	FAD binding domain of DNA photolyase;
reference complex	7yc7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yei_B interface=166,228,272,273,277,351,393,401,403,422, lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRndptknmlsnlspylhfgqissqrvvlevekaesnpgskkaflDEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkirymsyegckRkfdvklyiekys
interface signature	HRDEWMWRWR

Estimated binding specificities ?

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# IC=8.004 IC/col=0.800 n_of_columns=10

specificity:

A |   9   9   0  24   0  96  96   0  24   9
C |   9  67   0  24   0   0   0   0  24  67
G |  69  11  96  24  96   0   0  96  24  11
T |   9   9   0  24   0   0   0   0  24   9

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updated Fri Jan 9 19:49:32 2026