interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: 200 US TIME-POINT COLLECTED IN SACLA. INCLUDES 200 US, DARK, AND EXTRAPOLATED STRUCTURE FACTORS
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.60, R-factor=0.210)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRNDEWMRWR

Estimated binding specificities ?

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# IC=4.188 IC/col=1.047 n_of_columns=4 specificity:   
A |   0  14   0   0
C |  96  14   0  96
G |   0  16   0   0
T |   0  52  96   0
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updated Sat Aug 2 22:13:23 2025