interface graph thumbnail
legend  pdf

structure nameTR-SFX MMCPDII-DNA COMPLEX: 200 US TIME-POINT COLLECTED IN SACLA. INCLUDES 200 US, DARK, AND EXTRAPOLATED STRUCTURE FACTORS
(Deoxyribodipyrimidine photo-lyase)
referenceNgura Putu et al. Science 382 eadd7795 2023
sourceMethanosarcina mazei
experimentX-ray (resolution=2.60, R-factor=0.210)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRNDEWMRWR

Estimated binding specificities ?

contactlogo
# IC=3.393 IC/col=0.848 n_of_columns=4 specificity:   
A |   0  96  52   8
C |   0   0  14   8
G |  96   0  14  72
T |   0   0  16   8
scan!

home
updated Fri Jan 9 19:50:37 2026