7ywx_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX (HISTONE H3-LIKE CENTROMERIC PROTEIN A)
source	HOMO SAPIENS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	3an2_ABCDEFGH 3wtp_ABCDEFGH 6buz_ABCDEFGHN 6c0w_ABCDEFGHK 6l49_ABCDEFGHKLMNOPQRSTUVWXYZ 6se0_ABCDEFGH 6se6_ABCDEFGH 6see_ABCDEFGH 6sef_ABCDEFGH 6seg_ABCDEFGH 6tem_ABCDEFGH 7d20_ABCDEFGH 7pii_ABCDEFGH 7r5r_ABCDEFGH 7u46_ABCDEFGHK 7u47_ABCDEFGHK 7u47_LMNOPQRSV 7u4d_ABCDEFGHK 7u4d_LMNOPQRS 7ywx_ABCDEFGLNVW
redundant complexes	6se0_A 3an2 3wtp 6buz 6c0w 6l49 6se6 6see 6sef 6seg 6tem 7d20 7pii 7r5r 7u46 7u47 7u4d
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ywx_E interface=20, gwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl

  
  --LT--                                +-7ywx_E    
                           +------------2 
  --LC--                   !            +-8bvw_e    
                         +-5 
  ----RA                 ! !            +-7xsx_a    
                         ! !         +--3 
  RG----              +--7 +---------4  +-7k6p_D    
                      !  !           ! 
  ----RC              !  !           +----6qld_f    
                 +----8  ! 
  ----RG         !    !  +--------------7uv9_E    
               +-9    ! 
  ----RT       ! !    +-----------------8cww_A    
               ! ! 
  --LARG       ! +----------------------7unc_a    
             -10  
  --LTRC       !                       +3kwq_E    
               !        +--------------1 
  --LGRA   L   +--------6              +8he5_a    
                        ! 
  ----RT                +--------------8siy_G

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updated Wed Dec 20 00:18:17 2023