Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX
(HISTONE H3-LIKE CENTROMERIC PROTEIN A)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes3an2_ABCDEFGH 3wtp_ABCDEFGH 6buz_ABCDEFGHN 6c0w_ABCDEFGHK 6l49_ABCDEFGHKLMNOPQRSTUVWXYZ 6se0_ABCDEFGH 6se6_ABCDEFGH 6see_ABCDEFGH 6sef_ABCDEFGH 6seg_ABCDEFGH 6tem_ABCDEFGH 7d20_ABCDEFGH 7pii_ABCDEFGH 7r5r_ABCDEFGH 7u46_ABCDEFGHK 7u47_ABCDEFGHK 7u47_LMNOPQRSV 7u4d_ABCDEFGHK 7u4d_LMNOPQRS 7ywx_ABCDEFGLNVW
redundant complexes6se0_A 3an2 3wtp 6buz 6c0w 6l49 6se6 6see 6sef 6seg 6tem 7d20 7pii 7r5r 7u46 7u47 7u4d
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LARG                        +-------7unc_a    
                       +------2 
  --RA                 !      !    +--7xsx_a    
                       !      +----1 
  --RT       +---------4           +--8u14_G    
             !         ! 
  LC--       !         !   +----------8bvw_e    
           --5         +---3 
  --RG       !             +----------8txv_G    
             ! 
  --RC       +------------------------6qld_f    
           

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updated Sat Sep 14 07:49:53 2024