interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTGTATT SITE
(Forkhead box protein H1)
referenceMacias et al. 'To ? ? 2022
sourceDanio rerio
experimentX-ray (resolution=1.18, R-factor=0.141)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
reference complex7yz7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRDSRHNSYK

Estimated binding specificities ?

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# IC=7.670 IC/col=0.959 n_of_columns=8 specificity:   
A |  75  73   0  73   0  75   0  96
C |   7   7   0   7  96   7  96   0
G |   7   9   0   7   0   7   0   0
T |   7   7  96   9   0   7   0   0
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updated Tue Dec 17 15:00:25 2024