interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTATT SITE
(Forkhead box protein H1)
referenceMacias et al. 'To ? ? 2022
sourceDanio rerio
experimentX-ray (resolution=2.17, R-factor=0.212)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
reference complex7yz7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRDSRHNSK

Estimated binding specificities ?

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# IC=7.836 IC/col=0.979 n_of_columns=8 specificity:   
A |   0   0   8   0   0  96   8  10
C |   0   0  17   0   8   0   8   8
G |   0  96   0   0   0   0  11  17
T |  96   0  71  96  88   0  69  61
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updated Fri Sep 13 09:21:31 2024