interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTATT SITE
(Forkhead box protein H1)
referenceMacias et al. 'To ? ? 2022
sourceDanio rerio
experimentX-ray (resolution=2.17, R-factor=0.212)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
reference complex7yz7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRDSRHNSK

Estimated binding specificities ?

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# IC=7.700 IC/col=0.963 n_of_columns=8 specificity:   
A |  64  72   0  80  96  72   0  96
C |  16   8   0   0   0   8  96   0
G |   8   8   0  16   0   8   0   0
T |   8   8  96   0   0   8   0   0
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updated Fri Jan 9 20:00:32 2026