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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTACT SITE (FKH MOTIF GTAAACA)
(Forkhead box protein H1)
referenceMacias et al. 'To ? ? 2022
sourceDanio rerio
experimentX-ray (resolution=2.13, R-factor=0.213)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
reference complex7yz7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRDSRHSSK

Estimated binding specificities ?

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# IC=7.325 IC/col=0.916 n_of_columns=8 specificity:   
A |   1   0   8   0   6  96   8   6
C |   6   1   6   0   6   0  76   6
G |   0  89   6   0   8   0   6   8
T |  89   6  76  96  76   0   6  76
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updated Tue Dec 17 15:00:42 2024