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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTACT SITE (FKH MOTIF GTAAACA)
(Forkhead box protein H1)
referenceMacias et al. 'To ? ? 2022
sourceDanio rerio
experimentX-ray (resolution=2.13, R-factor=0.213)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
reference complex7yz7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRDSRHSSK

Estimated binding specificities ?

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# IC=7.578 IC/col=0.947 n_of_columns=8 specificity:   
A |  78   9   0  75  96  75   6  96
C |   6   6   0   9   0   6  89   0
G |   6  75   0   6   0   6   1   0
T |   6   6  96   6   0   9   0   0
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updated Fri Sep 13 09:21:37 2024