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3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Wed Jan 7 17:18:58 2026

structure name	STRUCTURE OF TRANSCRIPTION FACTOR UAF IN COMPLEX WITH TBP AND 35S RRNA PROMOTER DNA
source	SACCHAROMYCES CEREVISIAE
experiment	NMR
structural superfamily	Histone-fold;Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex	7e9c_A 8xgc_4
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7z0o_C interface=13, kphrykpgtvalReirrfqkstellirklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrge > 7z0o_D interface= hqqlrkyvelynKeveefyngaefhpskvhvksiheissvgvdwdseekntffwclsrysihrvdewrsllprksameilgyyrllrrasasarsrapiayemsaewvaletklsetvmaitegaaevadeeghceglidyeswkrrwvaiyshsriaeirplprhalplsrsatqtlercvsrytrtllwctalagmasrsvsaraslptvvtrrqveralctearsrdlhvlprrivltlrkweldypregklfrtkemahlflqsqlsrdeideadlfrsalhenqllkwlsk > 7z0o_E interface=236,248,249,250, etlksanelldslehshrvdlslhlysayllkrllykanekkhfyevnqfvktqikdnwtswpnpntiidpsvdklyedipvqpgeisnralmhasdmmrveldaqwqkflsksaldhdvtldvdelnipneisrnilvkldslfeglhdkiakenefdvrqdkhsnkytyhdlvsrgcemnedmtdiymkslelyndipekykkrkfrlpkqilkkyhqpkktssylkellsktRedfipvekllkDKRltskdksklqrlnreetedalnkrtffqvkgyledeneisdyelddcliel