7e9c_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	4jjn_ABCDEFGH 4kud_ABCDEFGH 7e9c_ABCDEFGH 7e9f_ABCDEFGH 7k7g_ABCDEFGHM 7z0o_CDE
redundant complexes	4jjn_E 7k7g_A 4kud 7e9f 7z0o 8xgc
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7e9c_A interface=2,3,11,25, hRYkpgtvalReirrfqkstelliRklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrg

  
  RG--RT----          +-----------------------------8grq_A    
                   +-10  
  RGLCRT----       !  +-----------------------------8hr1_E    
                   !  
  RG--------     -11                   +---------8jh2_e    
                   !          +--------5 
  ------RA--       !          !        +---------6g0l_D    
                   !          ! 
  ----RA----       +----------9            +------8rbx_M    
                              ! +----------4 
  ----RG----                  ! !          +------8jla_C    
                              ! ! 
  ----RG----                  +-8                 +8txv_G    
                                !  +--------------1 
  ----RG----                    !  !              +8ox0_C    
                                !  ! 
  ----RT----                    +--7                +8u14_G    
                                   !              +-2 
  ----RA----                       !    +---------3 +1zla_C    
                                   !    !         ! 
  ----RG----                       +----6         +5x0y_G    
                                        ! 
  ----RA--RA                            +---------6a5l_g

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updated Wed Dec 18 08:40:57 2024