Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes1id3_ABCDEFGH 4jjn_ABCDEFGH 4kud_ABCDEFGH 7e9c_ABCDEFGH 7e9f_ABCDEFGH 7k7g_ABCDEFGHM 7z0o_CDE
redundant complexes4jjn_E 7k7g_A 1id3 4kud 7e9f 7z0o 8xgc
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  RG--------                                     +8jh2_e    
                                  +--------------1 
  RG----RT--           +----------7              +6px1_A    
                       !          ! 
  ------RC--           !          +--------------7ux9_E    
                       !  
  ------RA--           !                    +-----8rbx_M    
                       !    +---------------5 
  ------RA--       +--10    !               +-----7e9c_F    
                   !   !  +-8 
  ------RT--       !   !  ! !                     +8u14_G    
                   !   !  ! !      +--------------2 
  ------RG--       !   !  ! +------6              +8upf_G    
                   !   +--9        ! 
  ------RC--       !      !        +--------------7yqk_C    
                 -11      ! 
  ------RG--       !      !                     +8txv_G    
                   !      +---------------------4 
  ------RARA       !                            ! +6a5l_g    
                   !                            +-3 
  ----HGRG--       !                              +8rbx_V    
                   !  
  --RG------       +-----------------------------7ccr_H    
                 

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updated Sat Jan 10 14:55:31 2026