7z4g_B : 3D-footprint complex

structure name	SPCAS9 BOUND TO 12-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE
experiment	NMR
multimeric complexes	7v59_BE
reference complex	6vpc_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7z4g_B interface=71,168,449,490,494,587,693,933,934,1045,1155,1157, dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrYtrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfNaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfMqlihddsltfkediqkaqvslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareneldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyespedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg
interface signature	YLYFMNMKEERR

Estimated binding specificities ?

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# IC=5.300 IC/col=0.408 n_of_columns=13

specificity:

A |  11   0   0  96   9  24  24  24  24  24  24  24   9
C |   9  96  96   0   9  24  24  24  24  24  24  24  11
G |   9   0   0   0  67  24  24  24  24  24  24  24   9
T |  67   0   0   0  11  24  24  24  24  24  24  24  67

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updated Tue Dec 17 15:08:24 2024