interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE HALF-CLOSED CONFORMATION
experimentNMR
structural superfamilyPLP-dependent transferases;"Winged helix" DNA-binding domain;
reference complex7zla_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signature/YKRSQNTER

Estimated binding specificities ?

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# IC=6.672 IC/col=0.953 n_of_columns=7 specificity:   
A |   0   9  67   0   0  11   0
C |   0   9  11   0   0   9  96
G |   0  69   9  96  96   9   0
T |  96   9   9   0   0  67   0
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updated Sun Dec 15 21:03:35 2024