8a0w_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HIGA2 ANTITOXIN IN COMPLEX WITH OPERATOR DNA
reference	Hadzi et al. 'To ? ? ?
source	Vibrio cholerae
experiment	X-ray (resolution=2.33, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	8a0w_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8a0w_A interface=20,32,33,35,36,39,41,42, elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael > 8a0w_B interface=20,32,33,35,36,39,41, elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRsvpngqavtllklvqrhpetlshiael
interface signature	RRTENQRS/RRTENQR

Estimated binding specificities ?

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# IC=12.245 IC/col=0.765 n_of_columns=16

specificity:

A |  12  96   0   0   0  24  24  24  24  24  12   0   0   0  96   0
C |  12   0  96   0  96  24  24  24  24  24  12  84   0   0   0  96
G |  12   0   0  96   0  24  24  24  24  24  60   0  96   0   0   0
T |  60   0   0   0   0  24  24  24  24  24  12  12   0  96   0   0

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updated Sun Dec 15 21:19:38 2024