8a0w_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HIGA2 ANTITOXIN IN COMPLEX WITH OPERATOR DNA (Antitoxin HigA-2)
reference	Hadzi et al. 'To ? ? ?
source	Vibrio cholerae
experiment	X-ray (resolution=2.33, R-factor=0.175)
structural superfamily	lambda repressor-like DNA-binding domains;
multimeric complexes	8a0w_AB 8a0x_ABD
redundant complexes	8a0x
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8a0w_B interface=20,32,33,35,36,39,41, elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRsvpngqavtllklvqrhpetlshiael
interface signature	RRTENQR

Estimated binding specificities ?

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# IC=5.766 IC/col=0.360 n_of_columns=16

specificity:

A |  13  24  24  24  24  24  24  24  24  24  24   0   0   0   0  54
C |  13  24  24  24  24  24  24  24  24  24  24   0  96   0   0  13
G |  54  24  24  24  24  24  24  24  24  24  24  96   0  96   0  13
T |  16  24  24  24  24  24  24  24  24  24  24   0   0   0  96  16

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updated Wed Dec 18 15:25:16 2024