8a0x_ABD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HIGB2-HIGA2 TETRAMER IN COMPLEX WITH OPERATOR DNA
reference	Hadzi et al. 'To ? ? ?
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	8a0w_B 8a0x_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8a0x_A interface=55,67,68,70,71,74,76,77, snrdlfaelssalveakqhsegkltlkthhvndvgelnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael > 8a0x_B interface=55,67,68,70,71,74,76,77, snrdlfaelssalveakqhsegkltlkthhvndvgelnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael > 8a0x_D interface=43, hmksvfvestifekyrdeylsdeeyrlfqaelmlnpklgdviQgtgglrkirvaskgkgkrggsriiyyfldekrrfylltiygknemsdlnanqrkqlmafmeawrneq
interface signature	RRTENQRS/RRTENQRS/Q

Estimated binding specificities ?

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# IC=10.111 IC/col=0.460 n_of_columns=22

specificity:

A |  52  24  24  24  24  24  24   6  96   0   0   1  24  24  24  24  24  23   4   0   0  76
C |   9  24  24  24  24  24  24   6   0  96   0  79  24  24  24  24  24   4  92   0   0   6
G |  29  24  24  24  24  24  24  18   0   0  96   0  24  24  24  24  24  69   0  96  34  11
T |   6  24  24  24  24  24  24  66   0   0   0  16  24  24  24  24  24   0   0   0  62   3

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updated Sun Dec 15 21:19:50 2024