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legend  pdf

structure nameTOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 40 BP TOXT PROMOTER DNA
referenceFabrega-Ferrer et al. Proc.Natl.Acad.Sci.USA 120 e2304378120 2023
sourceVibrio cholerae
experimentX-ray (resolution=2.64, R-factor=?)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
reference complex8b4b_W
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSSTQS/SSTQS/SSTQS

Estimated binding specificities ?

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# IC=11.286 IC/col=0.470 n_of_columns=24 specificity:   
A |   4   4  96  81  24  24  24  24  24  24   0   4  84  24  24  24  24  24  24  24   0   0  81  81
C |   7   4   0   7  24  24  24  24  24  24   0  92   4  24  24  24  24  24  24  24   0   0   4   4
G |   4   4   0   4  24  24  24  24  24  24   0   0   4  24  24  24  24  24  24  24   0   0   4   4
T |  81  84   0   4  24  24  24  24  24  24  96   0   4  24  24  24  24  24  24  24  96  96   7   7
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updated Wed Sep 11 20:38:24 2024