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legend  pdf

structure nameTOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 19 BP OMPU PROMOTER DNA
(Cholera toxin transcriptional activator)
referenceFabrega-Ferrer et al. Proc.Natl.Acad.Sci.USA 120 e2304378120 2023
sourceVibrio cholerae
experimentX-ray (resolution=1.75, R-factor=0.201)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyTranscriptional regulatory protein, C ter;
multimeric complexes8b4b_WXYZ 8b4d_BCD 8b4e_AB
redundant complexes8b4c_D 8b4d_B 8b4e_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --------NTVCECSTYTSTYC--RA   L           +-----------------------------5ed4_A    
                                         +-1 
  --------RGTCDCVA--RGRC--RC   L       +-2 +-----------------------------8hih_Q    
                                       ! ! 
  ----ST--------NASTRTHT----   L     +-3 +-----------------------------3l2c_A    
                                     ! ! 
  --------------NASTRGHTST--   L   +-4 +-----------------------------2c6y_A    
                                   ! ! 
  LTETTTRAECRCRCQC----------   L --5 +-----------------------------3n97_A    
                                   ! 
  --------------IA--KGNA----   L   +-----------------------------2hdd_A    
                                 

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updated Sat Sep 14 08:40:37 2024