8byx_AK : 3D-footprint complex

structure name	HOXB13-HOMODIMER BOUND TO DNA
reference	Morgunova et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	7psx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8byx_A interface=2,44,47,48,55, kRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekKvlak > 8byx_K interface=4,46,49,50, rkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlak
interface signature	RIQNK/RIQN

Estimated binding specificities ?

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# IC=11.963 IC/col=0.997 n_of_columns=12

specificity:

A |   9   0   0  96  11   0   0   0  96  24  11   0
C |  11   0   0   0   9   0   0   0   0  24   9   0
G |   9  96   0   0   9   0   0   0   0  24   9  96
T |  67   0  96   0  67  96  96  96   0  24  67   0

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updated Sun Dec 15 22:51:37 2024