8byx_AK : 3D-footprint complex

structure name	HOXB13-HOMODIMER BOUND TO DNA
reference	Morgunova et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8byx_A interface=2,44,47,48,55, kRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekKvlak > 8byx_K interface=4,46,49,50, rkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlak
interface signature	RIQNK/RIQN

Estimated binding specificities ?

contact

# IC=11.096 IC/col=0.925 n_of_columns=12

specificity:

A |   0  24  24   0  96  96  96  54   0  96   0  54
C |  96  24  24   0   0   0   0  13   0   0  96  16
G |   0  24  24   0   0   0   0  16   0   0   0  13
T |   0  24  24  96   0   0   0  13  96   0   0  13

scan!

home
updated Wed Sep 11 21:29:28 2024