| structure name | STRUCTURE OF HOXB13 BOUND TO HYDROXYMETHYLATED DNA (Homeobox protein Hox-B13) |
| reference | Morgunova et al. 'To ? ? ? |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.00, R-factor=0.261) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 5eg0_AB 5ego_AB 5no6_AN 5no6_BI 8byx_AK 8byx_BJ 8byx_GL |
| redundant complexes | 5ego_B
 8byx_B
5eg0
5no6
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RIQNK |
Estimated binding specificities ?
| readout + contact |  |
A | 6 24 24 24 24 24 24 6 6 96 0 12 96 24 6 C | 0 24 24 24 24 24 24 0 6 0 0 12 0 24 6 G | 12 24 24 24 24 24 24 6 6 0 0 66 0 24 78 T | 78 24 24 24 24 24 24 84 78 0 96 6 0 24 6scan! |
Dendrogram of similar interfaces ?
matrix formatRT--VTKGNA------KA-- L +-----------------------------2lkx_A ! RTQTVAQTNA---------- L ! +8osb_E ! +--------------1 RT--IAQCNA----MG---- L +-5 +----2 +1b72_A ! ! ! ! ----NCICNARGRG------ L ! ! +--3 +---------------4xrm_B ! ! ! ! RC--IAQCNA----YC---- L --6 +-----4 +--------------------3rkq_B ! ! ----VTCCNA----QA--RT L ! +-----------------------8g87_X ! --------------YCFAKC L +-----------------------------6pe2_B |
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updated Wed Dec 18 10:59:05 2024