8bzm_ABJ : 3D-footprint complex

structure name	FOXK1-ELF1-HETERODIMER BOUND TO DNA
reference	Morgunova et al. 'To ? ? ?
experiment	X-ray (resolution=2.69, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8bzm_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8bzm_A interface=48,49,51,52,53,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadkgwqNSiRHNlSlnryfikvprsqeepgkgsfwridpaseaklveqafrkr > 8bzm_B interface=58,61,64,65, ntiylwefllallqdkatcpkyikwtqrekgifklvdskavsrlwgkhknkpdmnyeTmgRalRYyyqrgilakvegqrlvyqfkemp > 8bzm_J interface=48,49,52,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadkgwqNSirHnlSlnryfikvprsqeepgkgsfwridpaseaklveqafrkr
interface signature	NSRHNS/TRRY/NSHS

Estimated binding specificities ?

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# IC=14.549 IC/col=1.039 n_of_columns=14

specificity:

A |   0  96  96  69  11  96   0   0  96  24   9   0  96  96
C |   0   0   0   9  67   0   0   0   0  24  19   0   0   0
G |   0   0   0   9   9   0  96  96   0  24  59   0   0   0
T |  96   0   0   9   9   0   0   0   0  24   9  96   0   0

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updated Sun Dec 15 22:51:50 2024