8bzm_ABJ : 3D-footprint complex

structure name	FOXK1-ELF1-HETERODIMER BOUND TO DNA
reference	Morgunova et al. 'To ? ? ?
experiment	X-ray (resolution=2.69, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8bzm_A interface=48,49,51,52,53,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadkgwqNSiRHNlSlnryfikvprsqeepgkgsfwridpaseaklveqafrkr > 8bzm_B interface=58,61,64,65, ntiylwefllallqdkatcpkyikwtqrekgifklvdskavsrlwgkhknkpdmnyeTmgRalRYyyqrgilakvegqrlvyqfkemp > 8bzm_J interface=48,49,52,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadkgwqNSirHnlSlnryfikvprsqeepgkgsfwridpaseaklveqafrkr
interface signature	NSRHNS/TRRY/NSHS

Estimated binding specificities ?

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# IC=14.474 IC/col=1.034 n_of_columns=14

specificity:

A |   0   0  96   9  24   0   0   0   0  11   9   0   0  96
C |   0   0   0  57  24   0  96  96   0   9   9   0   0   0
G |   0   0   0  11  24   0   0   0   0  67  11   0   0   0
T |  96  96   0  19  24  96   0   0  96   9  67  96  96   0

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updated Wed Sep 11 21:29:40 2024