8bzm_EHI : 3D-footprint complex

structure name	FOXK1-ELF1-HETERODIMER BOUND TO DNA
reference	Morgunova et al. 'To ? ? ?
experiment	X-ray (resolution=2.69, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8bzm_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8bzm_E interface=44,48,49,51,52,53,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadKgwqNSiRHNlSlnryfikvprsqeepgkgsfwridpaseaklveqafrkrr > 8bzm_H interface=57,58,61,64,65, ntiylwefllallqdkatcpkyikwtqrekgifklvdskavsrlwgkhknkpdmnyETmgRalRYyyqrgilakvegqrlvyqfkemp > 8bzm_I interface=48,49,52,55, skppfsyaqlivqaissaqdrqltlsgiyahitkhypyyrtadkgwqNSirHnlSlnryfikvprsqeepgkgsfwridpaseaklveqafrk
interface signature	KNSRHNS/ETRRY/NSHS

Estimated binding specificities ?

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# IC=12.299 IC/col=0.878 n_of_columns=14

specificity:

A |   3   3  96  24  24   3   0   0   0   7   3   6   3  96
C |   3   3   0  24  24   6  96  96   0  11   5   3   3   0
G |   2   3   0  24  24   3   0   0   0  67  11   3   6   0
T |  88  87   0  24  24  84   0   0  96  11  77  84  84   0

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updated Sun Dec 15 22:52:01 2024