8cef_CDJ : 3D-footprint complex

structure name	ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA
reference	Billas et al. 'Nucleic 51 8864 2023
source	Mus musculus
experiment	X-ray (resolution=2.49, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8cef_C interface=24,27,28,31,32,82,85, lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR > 8cef_D interface=23,26,27,30,31,81,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR > 8cef_J interface=23,26,27,30,31,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvrggRqkyk
interface signature	EKAKRRR/EKAKRRR/EKAKRR

Estimated binding specificities ?

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# IC=8.229 IC/col=0.329 n_of_columns=25

specificity:

A |  24  24  19  19  24  60   5   8  18   9  84   8  10  16   7   4  57  12   0   6  24  18  42  25  24
C |  24  24  20  38  24  12   3  10  18  67   4  70  63  19   7   4  13  60  96   6  24  18  18  27  24
G |  24  24  19  19  24  12  85  70  18  11   4   8  13  45   8  81  13  12   0   6  24  18  18  22  24
T |  24  24  38  20  24  12   3   8  42   9   4  10  10  16  74   7  13  12   0  78  24  42  18  22  24

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updated Sun Dec 17 20:09:34 2023