8cef_CDJ : 3D-footprint complex

structure name	ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA
reference	Billas et al. 'Nucleic 51 8864 2023
source	Mus musculus
experiment	X-ray (resolution=2.49, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8cef_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8cef_C interface=24,27,28,31,32,82,85, lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR > 8cef_D interface=23,26,27,30,31,81,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR > 8cef_J interface=23,26,27,30,31,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvrggRqkyk
interface signature	EKAKRRR/EKAKRRR/EKAKRR

Estimated binding specificities ?

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# IC=16.249 IC/col=1.083 n_of_columns=15

specificity:

A |  96   0   0   6   0  96  15   0   0   0   0  55   0   0   5
C |   0   0   0  65  96   0  56   0   0   0   0  10  96  96   5
G |   0  96  96   5   0   0  10  96  96   0  96  16   0   0  10
T |   0   0   0  20   0   0  15   0   0  96   0  15   0   0  76

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updated Wed Jan 7 20:09:33 2026