8cef_GHK : 3D-footprint complex

structure name	ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA
reference	Billas et al. 'Nucleic 51 8864 2023
source	Mus musculus
experiment	X-ray (resolution=2.49, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8cef_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8cef_G interface=22,25,26,29,30,80, krlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvR > 8cef_H interface=23,26,27,30,31,81,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky > 8cef_K interface=24,27,28,31,32,82,85, lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky
interface signature	EKAKRR/EKAKRRR/EKAKRRR

Estimated binding specificities ?

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# IC=18.201 IC/col=1.011 n_of_columns=18

specificity:

A |  72   0   0   0   0  89  13   0   0   0   0  72   0   0   3  24  10  87
C |  10   0   0   3  96   3  68   0   0   0   0   8  96  96   3  24   3   3
G |  10  96  96   1   0   3   9  96  96   0  96   6   0   0   3  24  72   3
T |   4   0   0  92   0   1   6   0   0  96   0  10   0   0  87  24  11   3

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updated Wed Sep 11 21:32:51 2024