8cef_GHK : 3D-footprint complex

structure name	ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA
reference	Billas et al. 'Nucleic 51 8864 2023
source	Mus musculus
experiment	X-ray (resolution=2.49, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8cef_G interface=22,25,26,29,30,80, krlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvR > 8cef_H interface=23,26,27,30,31,81,84, pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky > 8cef_K interface=24,27,28,31,32,82,85, lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky
interface signature	EKAKRR/EKAKRRR/EKAKRRR

Estimated binding specificities ?

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# IC=7.423 IC/col=0.297 n_of_columns=25

specificity:

A |  24  24  24  24  27  52  10   9  10   3  74  18  12  10   6  11  42  11   3   9  24  14  66  22  24
C |  24  24  24  24  25  14   8   9  10  87   7  42  12  10   6   9  18  67  87   9  24  14  10  30  24
G |  24  24  24  24  22  16  70  67  13   3   8  18  60  63   6  67  18   9   3  11  24  54  10  22  24
T |  24  24  24  24  22  14   8  11  63   3   7  18  12  13  78   9  18   9   3  67  24  14  10  22  24

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updated Sun Dec 17 20:09:46 2023