interface graph thumbnail
legend  pdf

structure nameETV6 H396Y VARIANT BOUND TO DNA CONTAINING THE SEQUENCE GGAA
(Transcription factor ETV6)
referenceMcIntosh et al. 'to ? ? ?
sourceMus musculus
experimentX-ray (resolution=2.35, R-factor=0.220)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
reference complex4mhg_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRARY

Estimated binding specificities ?

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# IC=3.586 IC/col=0.256 n_of_columns=14 specificity:   
A |  24  24  24  27  13  21   8   6   0   4  24  24  24  24
C |  24  24  24  22  56  21   8  78  96   4  24  24  24  24
G |  24  24  24  25  14  23   8   6   0  81  24  24  24  24
T |  24  24  24  22  13  31  72   6   0   7  24  24  24  24
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updated Tue Dec 19 02:54:51 2023