interface graph thumbnail
legend  pdf

structure nameETV6 H396Y VARIANT BOUND TO DNA CONTAINING THE SEQUENCE GGAA
(Transcription factor ETV6)
referenceMcIntosh et al. 'to ? ? ?
sourceMus musculus
experimentX-ray (resolution=2.35, R-factor=0.220)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRARY

Estimated binding specificities ?

readout + contactlogo
# IC=3.540 IC/col=0.590 n_of_columns=6 specificity:   
A |   4   0   6  70  31  13
C |  81   0   6   8  21  13
G |   7  96  78  10  23  56
T |   4   0   6   8  21  14
scan!

home
updated Tue Dec 17 16:19:58 2024