interface graph thumbnail
legend  pdf

structure nameETV6 H396Y VARIANT BOUND TO DNA CONTAINING THE SEQUENCE GGAT
(Transcription factor ETV6)
referenceMcIntosh et al. 'to ? ? ?
sourceMus musculus
experimentX-ray (resolution=2.30, R-factor=0.214)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKRRY

Estimated binding specificities ?

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# IC=3.305 IC/col=0.826 n_of_columns=4 specificity:   
A |   0   0   0  16
C |  16  96  96  16
G |  16   0   0  48
T |  64   0   0  16
scan!

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updated Tue Dec 17 16:20:04 2024