interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA
referenceAihara et al. Iscience 26 107823 2023
sourceOrnithorhynchus anatinus
experimentX-ray (resolution=2.67, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex8ejp_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRVQN/RRVQNR

Estimated binding specificities ?

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# IC=10.903 IC/col=0.839 n_of_columns=13 specificity:   
A |   0  10  96  96   0  24  65  24  60   0   0  96  75
C |   5  10   0   0   0  24   5  24  10   0  96   0  10
G |  91  10   0   0   0  24  11  24  16   0   0   0   5
T |   0  66   0   0  96  24  15  24  10  96   0   0   6
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updated Wed Sep 11 23:20:01 2024