8ejo_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA
reference	Aihara et al. Iscience 26 107823 2023
source	Ornithorhynchus anatinus
experiment	X-ray (resolution=2.67, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	8ejp_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ejo_A interface=2,5,47,50,51, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq > 8ejo_B interface=2,5,47,50,51,55, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq
interface signature	RRVQN/RRVQNR

Estimated binding specificities ?

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# IC=11.016 IC/col=0.847 n_of_columns=13

specificity:

A |   5   0   0  96  10  24  18  24  96   0   0  69   0
C |   7   0   0   0  16  24  10  24   0   0   0  12  96
G |  10   0  96   0  10  24  10  24   0   0   0   5   0
T |  74  96   0   0  60  24  58  24   0  96  96  10   0

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updated Wed Jan 7 22:23:26 2026