8ejp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA CONTAINING 5-BROMOURACIL
reference	Aihara et al. Iscience 26 107823 2023
source	Ornithorhynchus anatinus
experiment	X-ray (resolution=2.17, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	8ejp_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ejp_A interface=2,5,47,50,51, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq > 8ejp_B interface=2,5,47,50,51,55, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq
interface signature	RRVQN/RRVQNR

Estimated binding specificities ?

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# IC=12.894 IC/col=1.075 n_of_columns=12

specificity:

A |   0   0  96   0  13  13   1  96   0   0  68   0
C |   0   0   0   0   6   6   0   0   0   6  13  96
G |   0  96   0   0  13   6   6   0   0   0   9   0
T |  96   0   0  96  64  71  89   0  96  90   6   0

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updated Wed Jan 7 22:23:33 2026