8ejp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA CONTAINING 5-BROMOURACIL
reference	Aihara et al. Iscience 26 107823 2023
source	Ornithorhynchus anatinus
experiment	X-ray (resolution=2.17, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	8ejp_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ejp_A interface=2,5,47,50,51, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq > 8ejp_B interface=2,5,47,50,51,55, aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq
interface signature	RRVQN/RRVQNR

Estimated binding specificities ?

readout + contact

# IC=12.807 IC/col=1.067 n_of_columns=12

specificity:

A |   0   0  96   0  16  14   0  96   0   0  68   0
C |   0   0   0   0   7   9   0   0   0   8  14  96
G |   0  96   0   0   7   7   7   0   0   0   7   0
T |  96   0   0  96  66  66  89   0  96  88   7   0

scan!

home
updated Sat Jun 27 08:02:16 2026