8g87_X : 3D-footprint complex

structure name	HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE (FOCUSED REFINEMENT OF OCT4 BOUND REGION)
experiment	NMR
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
sequence family	Pou domain Nterminal to homeobox domain;
redundant complexes	8g8e_X
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8g87_X interface=41,42,43,46,47,120,123,124,127,131, kalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfSQTtiCRfealqlsfknmcklrpllqkwveeadnnenlqeienrvrgnlenlflqcpkptlqqishiaqqlglekdvvrVwfCNrrQkgkRs
interface signature	SQTCRVCNQR

Estimated binding specificities ?

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# IC=1.738 IC/col=0.193 n_of_columns=9

specificity:

A |  13  56  20  14  12  24  60  63  19
C |  13  13  20  14  60  24  12  10  19
G |  14  14  22  52  12  24  12  10  19
T |  56  13  34  16  12  24  12  13  39

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updated Sat Jan 10 23:22:53 2026