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structure nameHUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE (FOCUSED REFINEMENT OF OCT4 BOUND REGION)
experimentNMR
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;
sequence familyPou domain Nterminal to homeobox domain;
redundant complexes8g8e_X
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTCRVCNQR

Estimated binding specificities ?

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# IC=8.142 IC/col=0.905 n_of_columns=9 specificity:   
A |  33   0   0  24   0   0  44   0  96
C |  21   0   0  24   0  96  21   0   0
G |  21   0   0  24  96   0  21   0   0
T |  21  96  96  24   0   0  10  96   0
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updated Wed Dec 20 02:43:45 2023