8hbm_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA
reference	Jiang et al. 'Comput 21 3149 2023
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8hbm_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hbm_A interface=23,26,30,31, tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer > 8hbm_B interface=22,29,30,54, delcvvcgdrasgyhynaltcEgckgffRRsitknavykcknggncvmdmymrRkcqecrlrkckemgmlaec
interface signature	EKKR/ERRR

Estimated binding specificities ?

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# IC=8.232 IC/col=0.823 n_of_columns=10

specificity:

A |   0   0  10   0  96  24  10   0  24   0
C |   0   0  21  96   0  24  21   0  24  96
G |  96  96  21   0   0  24  23  96  24   0
T |   0   0  44   0   0  24  42   0  24   0

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updated Mon Dec 16 04:03:58 2024