8hbm_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA
reference	Jiang et al. 'Comput 21 3149 2023
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A 8hbm_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hbm_A interface=23,26,30,31, tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer > 8hbm_B interface=22,29,30,54, delcvvcgdrasgyhynaltcEgckgffRRsitknavykcknggncvmdmymrRkcqecrlrkckemgmlaec
interface signature	EKKR/ERRR

Estimated binding specificities ?

readout + contact

# IC=8.229 IC/col=0.823 n_of_columns=10

specificity:

A |   0   0  12   0  96  24  24   0  24   0
C |   0   0  24  96   0  24  24   0  24  96
G |  96  96  12   0   0  24  12  96  24   0
T |   0   0  48   0   0  24  36   0  24   0

scan!

home
updated Fri Aug 1 10:53:13 2025