8hbm_EF : 3D-footprint complex

structure name	STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA
reference	Jiang et al. 'Comput 21 3149 2023
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8hbm_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hbm_E interface=21,29, khicaicgdrsgkhygvyscEgckgffkRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer > 8hbm_F interface=22,25, delcvvcgdrasgyhynaltcEgcKgffrsitknavykcknggncvmdmymrrkcqecrlrkckemgmlaec
interface signature	ER/EK

Estimated binding specificities ?

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# IC=5.849 IC/col=0.650 n_of_columns=9

specificity:

A |   0  96  24  24  24  57   0   0  13
C |  96   0  24  24  24  13  96  96  13
G |   0   0  24  24  24  13   0   0  13
T |   0   0  24  24  24  13   0   0  57

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updated Mon Dec 16 04:04:09 2024