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legend  pdf

structure nameCO-CRYSTAL STRUCTURE OF THE C TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS CONSERVED PROMOTER DNA IN 2.95 ANGSTROM RESOLUTION
(DNA-binding response OmpR family regulator)
referenceXu et al. Proc.Natl.Acad.Sci.USA 120 e2300282120 2023
sourceSaccharopolyspora erythraea NRRL 2338
experimentX-ray (resolution=2.95, R-factor=0.262)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyTranscriptional regulatory protein, C ter;
multimeric complexes8hml_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRTDVRRR

Estimated binding specificities ?

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# IC=6.633 IC/col=0.948 n_of_columns=7 specificity:   
A |   0   0  11   0  67   0   9
C |   0   0   9   0  11  96   9
G |   0  96   9   0   9   0  67
T |  96   0  67  96   9   0  11
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updated Wed Dec 18 18:20:01 2024