8ia3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN USF2 BHLHLZ DOMAIN IN COMPLEX WITH DNA
reference	Huang et al. J.Biol.Chem. 299 105240 2023
source	Homo sapiens
experiment	X-ray (resolution=3.50, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;Leucine zipper domain;
reference complex	8ia3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ia3_A interface=5,6,8,9,12,13, rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqhnlemvgeg > 8ia3_B interface=5,6,8,9,12,13, rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqh
interface signature	HNVERR/HNVERR

Estimated binding specificities ?

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# IC=11.096 IC/col=1.110 n_of_columns=10

specificity:

A |  16   0   0  96   0   0   0   0   0  13
C |  13   0  96   0  96   0   0   0  96  54
G |  54   0   0   0   0  96   0  96   0  16
T |  13  96   0   0   0   0  96   0   0  13

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updated Mon Dec 16 04:38:29 2024