interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF R2 WITH 3'UTR AND DNA IN BINDING STATE
experimentNMR
structural superfamilyDNA/RNA polymerases;
sequence familyReverse transcriptase RNAdependent DNA pol; Zinc finger, C2H2 type;
reference complex8gh6_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKREKRHK

Estimated binding specificities ?

contactlogo
# IC=11.002 IC/col=0.846 n_of_columns=13 specificity:   
A |   6   0  11   3   0   3   3   3  24  96   0  24   0
C |  84  92  14  84  96   3   6   6  24   0  96  24  96
G |   3   3  64   6   0  87   3  14  24   0   0  24   0
T |   3   1   7   3   0   3  84  73  24   0   0  24   0
scan!

home
updated Fri Sep 13 11:44:54 2024