8it1_EF : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM)
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ifk_A 8ifk_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8it1_E interface=320,349, mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihaRtrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsmevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi > 8it1_F interface=263,289,358,362,431,434,435,438,442, mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeEdteDldeledie
interface signature	RS/RKHRANNED

Estimated binding specificities ?

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# IC=5.467 IC/col=0.607 n_of_columns=9

specificity:

A |  19  24  80  24  24  18   0  96   0
C |  52  24   8  24  24   0  96   0   0
G |   8  24   0  24  24  17   0   0   0
T |  17  24   8  24  24  61   0   0  96

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updated Mon Dec 16 05:06:19 2024