8it1_IJ : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM)
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ifk_A 8ifk_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8it1_I interface=393, mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkskplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi > 8it1_J interface=263,289,358,362,431,434,435,438,440,442, mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeEdTeDldeledie
interface signature	M/RKHRANNETD

Estimated binding specificities ?

contact

# IC=5.766 IC/col=0.524 n_of_columns=11

specificity:

A |   0  24  13  13  24  24  24  24   0  96   0
C |   0  24  54  16  24  24  24  24  96   0   0
G |   0  24  16  13  24  24  24  24   0   0   0
T |  96  24  13  54  24  24  24  24   0   0  96

scan!

home
updated Mon Dec 16 05:06:37 2024