8j54_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RXR/DR2 COMPLEX
reference	Jiang et al. Structure 32 467 2024
experiment	X-ray (resolution=2.72, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j54_E interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer > 8j54_F interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer
interface signature	EKKR/EKKR

Estimated binding specificities ?

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# IC=9.631 IC/col=0.741 n_of_columns=13

specificity:

A |   6   0  92   0  13  24  24  24   0   0  65   3   3
C |   3   0   0  96  65  24  24  24   0   3   7  84  84
G |   3  96   4   0   7  24  24  24   0  90  13   6   3
T |  84   0   0   0  11  24  24  24  96   3  11   3   6

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updated Sat Jun 27 12:59:43 2026