8j54_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RXR/DR2 COMPLEX
reference	Jiang et al. Structure 32 467 2024
experiment	X-ray (resolution=2.72, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j54_E interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer > 8j54_F interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer
interface signature	EKKR/EKKR

Estimated binding specificities ?

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# IC=9.548 IC/col=0.734 n_of_columns=13

specificity:

A |   6   3   7   3  96  24  24  24  11   0   3   0  87
C |   3   6  11  84   0  24  24  24   7   0   3  96   3
G |  84  84   5   6   0  24  24  24  70  96   3   0   3
T |   3   3  73   3   0  24  24  24   8   0  87   0   3

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updated Thu Jan 8 03:25:33 2026