8jcc_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HUMAN HISTONE H2B VARIANT H2BFWT CRYO-EM STRUCTURE WITH 601 DNA SEQUENCE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	8jcc_ABCDEFGH 8jcd_ABCDEFGH
redundant complexes	8jcd
links to other resources	NAKB PDIdb DNAproDB

  
  IT------          +-----------------------------3wkj_D    
                 +-10  
  ----RT--       !  +-----------------------------7kbd_C    
                 !  
  ------KG       !                         +---7nkx_f    
                 ! +-----------------------1 
  ----RG--     -11 !                       +---7unc_a    
                 ! ! 
  ----RC--       ! !                           +---7xyf_B    
                 ! !              +------------2 
  ----RG--       ! !          +---3            +---6iy2_A    
                 ! !          !   ! 
  ----RC--       +-9       +--4   +----------------3kwq_E    
                   !       !  ! 
  --KT----   L     !     +-5  +--------------------7cvo_A    
                   !     ! ! 
  ----RG--         !   +-6 +-----------------------7ccr_A    
                   !   ! ! 
  ----RC--         ! +-7 +------------------------4xzq_E    
                   ! ! ! 
  ----RT--         +-8 +-------------------------7zs9_e    
                     ! 
  ----RG--           +--------------------------7y7i_E

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updated Sat Sep 14 11:08:25 2024