8jkl_GH : 3D-footprint complex

structure name	IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF
reference	Wang et al. Structure 31 1441 2023
source	Homo sapiens
experiment	X-ray (resolution=2.94, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jkl_G interface=75,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelvisdpykvyrivpe > 8jkl_H interface=2,38,77,78,79,82, gKlrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCAlnKsndfeelversqldisdpykvyrivp
interface signature	TRCK/KKRCAK

Estimated binding specificities ?

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# IC=11.537 IC/col=0.961 n_of_columns=12

specificity:

A |   3   0   0   6  12   3   0   9  60   0   0  96
C |   3   0  96   9  63   3   0   6  12   0  96   0
G |   4   0   0   9   9  87  96  13  12   0   0   0
T |  86  96   0  72  12   3   0  68  12  96   0   0

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updated Sat Jun 27 13:41:18 2026