8jkl_GH : 3D-footprint complex

structure name	IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF
reference	Wang et al. Structure 31 1441 2023
source	Homo sapiens
experiment	X-ray (resolution=2.94, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jkl_G interface=75,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelvisdpykvyrivpe > 8jkl_H interface=2,38,77,78,79,82, gKlrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCAlnKsndfeelversqldisdpykvyrivp
interface signature	TRCK/KKRCAK

Estimated binding specificities ?

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# IC=11.478 IC/col=0.956 n_of_columns=12

specificity:

A |   3   0   0   9   9   3   0  12  60   0   0  96
C |   3   0  96   6  68   3   0   9  12   0  96   0
G |   4   0   0  10   7  86  96  12  12   0   0   0
T |  86  96   0  71  12   4   0  63  12  96   0   0

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updated Thu Jan 8 04:07:17 2026